Chemical Fueling Enables Molecular Complexification of Self-Replicators
Authors
Shuo Yang, Dr. Gael Schaeffer, Dr. Elio Mattia, Dr. Omer Markovitch, Dr. Kai Liu, Andreas S. Hussain, Jim Ottelé, Ankush Sood, Prof. Dr. Sijbren Otto
Publication
Angewandte Chemie, 10 March 2021
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Interaction of Aromatic Molecules with Forsterite: Accuracy of the Periodic DFT-D4 Method
Authors
Dario Campisi, Thanja Lamberts, Nelson Y. Dzade, Rocco Martinazzo, Inge Loes ten Kate, and Alexander G. G. M. Tielens
Publication
The Journal of Physical Chemistry A, 30 March 2021
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The role of planetary interior in the long-term evolution ofatmospheric CO2on Earth-like exoplanets
Authors
M. Oosterloo, D. Höning, I. E. E. Kamp, F. F. S. van der Tak
Publication
Astronomy & Astrophysics, March 2021
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Finite representation of reaction kinetics in unbounded biopolymer structures
Authors
Yuliia Orlova, Alessa A. Gambardella, Rebecca E. Harmon, Ivan Kryven, Piet D. Iedema
Publication
Chemical Engineering Journal, 1 February 2021
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Temperature inversions on hot super-Earths: the case of CN in nitrogen-rich atmospheres
Authors
Mantas Zilinskas, Yamila Miguel, Yipeng Lyu, Morris Bax
Publication
Monthly Notices of the Royal Astronomical Society, January 2021
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Emergence of low-symmetry foldamers from single monomers
Authors
Charalampos G. Pappas, Pradeep K. Mandal, Bin Liu, Brice Kauffmann, Xiaoming Miao, Dávid Komáromy, Waldemar Hoffmann, Christian Manz, Rayoon Chang, Kai Liu, Kevin Pagel, Ivan Huc & Sijbren Otto
Publication
Nature Chemistry, 20 November 2020
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Hierarchical Multivalent Effects Control Influenza Host Specificity
Authors
Nico J. Overeem, P. H. Erik Hamming, Oliver C. Grant, Daniele Di Iorio, Malte Tieke, M. Candelaria Bertolino, Zeshi Li, Gaël Vos, Robert P. de Vries, Robert J. Woods, Nicholas B. Tito, Geert-Jan P. H. Boons, Erhard van der Vries, and Jurriaan Huskens
Publication
ACS central science, 12 November 2020
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Timing the origin of eukaryotic cellular complexity with ancient duplications
Authors
Julian Vosseberg, Jolien J. E. van Hooff, Marina Marcet-Houben, Anne van Vlimmeren, Leny M. van Wijk, Toni Gabaldón & Berend Snel
Publication
Nature Ecology & Evolution, 26 October 2020
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Evolution of multicellularity by collective integration of spatial information
Authors
Enrico Sandro Colizzi, Renske MA Vroomans, Roeland MH Merks
Publication
eLife, October 22, 2020
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How to Understand Cells Well Enough to Predict Evolution: Polarity Establishment in Budding Yeast as a Case Study
Authors
W.G. Daalman, E. Sweep, L. Laan
Publication
1 October 2020
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Measuring the atomic composition of planetary building blocks
Authors
M.K. McClure, C. Dominik, M. Kama
Publication
Astronomy & Astrophysics, October 2020
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DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
Authors
Rampal Etienne, Luis Lima Valente, Albert B. Phillimore, Bart Haegeman, Joshua Lambert, Pedro Neves, Shu Xie, Richèl Bilderbeek, Torsten Hauffe, Giovanni Laudanno, Nadiah Kristensen, Raphaël Scherrer
Publication
Comprehensive R Archive Network, 27 September 2020
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Adaptability and evolution of the cell polarization machinery in budding yeast
Authors
Fridtjof Brauns, Leila M. Iñigo de la Cruz, Werner K.-G. Daalman, Ilse de Bruin, Jacob Halatek, Liedewij Laan, Erwin Frey
Publication
bioRxiv, 10 September 2020
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Harnessing ecological and evolutionary principles to guide the design of microbial production consortia
Authors
Samir Giri, Shraddha Shitut, Christian Kost
Publication
1 April 2020
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Evolution of multicellularity by collective integration of spatial information
Authors
Enrico Sandro Colizzi, Renske M.A. Vroomans, Roeland M.H. Merks
Publication
February 20, 2020
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Systems protobiology: origin of life in lipid catalytic networks
Authors
Doron Lancet, Raphael Zidovetzki and Omer Markovitch
Publication
25 juli 2018
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Recurrent sequence evolution after independent gene duplication
Authors
Samuel H. A. von der Dunk & Berend Snel
Publication
BMC evolutionary biology, 8 August 2020
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Bifurcation in the growth of continental crust
Authors
Dennis Höning, Nicola Tosi, Hendrik Hansen-Goos, Tilman Spohn
Publication
February 2019
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Caught in the Act: Mechanistic Insight into Supramolecular Polymerization-Driven Self-Replication from Real-Time Visualization
Authors
Sourav Maity, Jim Ottele, Guillermo Monreal Santiago, Pim W. J. M. Frederix, Peter Kroon, Omer Markovitch, Marc C. A. Stuart, Siewert J. Marrink, Sijbren Otto, and Wouter H. Roos
Publication
31 July 2020
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Transcriptional Mutagenesis Prevents Ribosomal DNA Deterioration: The Role of Duplications and Deletions
Authors
Enrico Sandro Colizzi, Paulien Hogeweg
Publication
25 October 2019
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Continual evolution through coupled fast and slow feedbacks
Authors
Meike T. Wortel, Han Peters, Juan A. Bonachela, and Nils Chr. Stenseth
Publication
February 25, 2020
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Estimated Minimum Life Span of the Jezero Fluvial Delta (Mars)
Authors
Francesco Salese, Maarten G. Kleinhans, Nicolas Mangold, Veronique Ansan, William McMahon, Tjalling de Haas, and Gilles Dromart
Publication
Astrobiology, 6 August 2020
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The Emergence of Life
Authors
E. Camprubí, J. W. de Leeuw, C. H. House, F. Raulin, M. J. Russell, A. Spang, M. R. Tirumalai & F. Westall
Publication
12 Dec 2019
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Chemical Heredity as Group Selection at the Molecular Level
Authors
Omer Markovitch, Olaf Witkowski, Nathaniel Virgo
Publication
22 Feb 2018
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Perspective: Science policy through public engagement
Authors
Rafael Loureiro, Omer Markovitch, Crystal S Riley, H James Cleaves, II, I Haritina Mogoșanu, Ivan G Paulino-Lima, Jeffrey J Marlow, Sanjoy M Som
Publication
3 Sept. 2020
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From self-replication to replicator systems en route to de novo life
Authors
Paul Adamski, Marcel Eleveld, Ankush Sood, Ádám Kun, András Szilágyi, Tamás Czárán, Eörs Szathmáry & Sijbren Otto
Publication
Nature Reviews Chemistry, 1 July 2020
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Chance emergence of catalytic activity and promiscuity in a self-replicator
Authors
Jim Ottelé, Andreas S. Hussain, Clemens Mayer & Sijbren Otto
Publication
Nature Catalysis, 26 June 2020
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Carbon cycling and interior evolution of water-covered plate tectonics and stagnant-lid planets.
Authors
Höning, D., Tosi, N., Spohn, T.
Publication
1 July 2019
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Emergence of light-driven protometabolism on recruitment of a photocatalytic cofactor by a self-replicator
Authors
Guillermo Monreal Santiago, Kai Liu, Wesley R. Browne & Sijbren Otto
Publication
Nature Chemistry, 26 June 2020
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Shannon Entropy as an Indicator for Sorting Processes in Hydrothermal Systems
Authors
Frank J. A. van Ruitenbeek, Jasper Goseling, Wim H. Bakker and Kim A. A. Hein
Publication
Entropy, 13 June 2020
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Enrichment of the HR 8799 planets by minor bodies and dust
Authors
K. Frantseva, M. Mueller, P. Pokorný, F. F. S. van der Tak and I. L. ten Kate
Publication
Astronomy & Astrophysics 10 June 2020
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Pleiotropy allows recovery of phenotypic plasticity in constant environments
Authors
Enzo Kingma, Eveline T. Diepeveen, Leila Iñigo de la Cruz, Liedewij Laan
Publication
bioRxiv, 2 June 2020
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Classification of link-breaking and link-creation updating rules in susceptible-infected-susceptible epidemics on adaptive networks
Authors
Massimo A. Achterberg, Johan L. A. Dubbeldam, Cornelis J. Stam, and Piet Van Mieghem
Publication
Physical Review E, 4 May 2020
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Atmospheric compositions and observability of nitrogen-dominated ultra-short-period super-Earths
Authors
Mantas Zilinskas, Yamila Miguel, Paul Mollière, Shang-Min Tsai
Publication
Monthly Notices of the Royal Astronomical Society, May 2020
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Recruitment of receptors at supported lipid bilayers promoted by the multivalent binding of ligand-modified unilamellar vesicles
Authors
Daniele Di Iorio, Yao Lu, Joris Meulman and Jurriaan Huskens
Publication
Chemical Science, 9 March 2020
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Do defects in PAHs promote catalytic activity in space? Stone–Wales pyrene as a test case
Authors
Dario Campisi and Alessandra Candian
Publication
Physical Chemistry Chemical Physics, 28 February 2020
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A simple dynamic model explains the diversity of island birds worldwide
Authors
Luis Valente, Albert B. Phillimore, Martim Melo, Ben H. Warren, Sonya M. Clegg, Katja Havenstein, Ralph Tiedemann, Juan Carlos Illera, Christophe Thébaud, Tina Aschenbach & Rampal S. Etienne
Publication
Nature, 19 February 2020
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Predicting Evolution Using Regulatory Architecture
Authors
Philippe Nghe, Marjon G.J. de Vos, Enzo Kingma, Manjunatha Kogenaru, Frank J. Poelwijk, Liedewij Laan, and Sander J. Tans
Publication
Annual review of biophysics, 4 February 2020
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Patterning in Mussel Beds Explained by the Interplay of Multi-Level Selection and Spatial Self-Organization
Authors
Monique de Jager, Johan van de Koppel, Ellen J. Weerman and Franz J. Weissing
Publication
Frontiers in Ecology and Evolution, 30 January 2020
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Elementary Growth Modes provide a molecular description of cellular self-fabrication
Authors
Daan H. de Groot, Josephus Hulshof, Bas Teusink, Frank J. Bruggeman, Robert Planqué
Publication
PLoS computational biology, 27 January 27 2020
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Diverse outcomes of planet formation and composition around low-mass stars and brown dwarfs
Authors
Y. Miguel, A. Cridland, C. W. Ormel, J. J. Fortney, S. Ida
Publication
Monthly Notices of the Royal Astronomical Society, January 2020
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The unstructured linker arms of MutL enable GATC site incision beyond roadblocks during initiation of DNA mismatch repair
Authors
Yannicka S. N. Mardenborough, Katerina Nitsenko, Charlie Laffeber, Camille Duboc, Enes Sahin, Audrey Quessada-Vial, Herrie H. K. Winterwerp, Titia K. Sixma, Roland Kanaar, Peter Friedhoff, Terence R. Strick, Joyce H. G. Lebbink
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Nucleic acids research, 16 December 2019
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Superhydrogenation of pentacene: the reactivity of zigzag-edges
Authors
Dario Campisi , Frederik Doktor S. Simonsen, John D. Thrower, Rijutha Jaganathan, Liv Hornekær, Rocco Martinazzo and Alexander G. G. M. Tielens
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Physical Chemistry Chemical Physics, 16 December 2019
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Carbon depletion observed inside T Tauri inner rims. Formation of icy, kilometer size planetesimals by 1 Myr
Authors
M. K. McClure
Publication
Astronomy & Astrophysics, December 2019
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Percolation clusters of organics in interstellar ice grains as the incubators of life
Authors
Saibal Mitra
Publication
Progress in biophysics and molecular biology, December 2019
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The common message of constraint-based optimization approaches: overflow metabolism is caused by two growth-limiting constraints
Authors
Daan H. de Groot, Julia Lischke, Riccardo Muolo, Robert Planqué, Frank J. Bruggeman & Bas Teusink
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Cellular and Molecular Life Sciences, 22 November 2019
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Influenza as a molecular walker
Authors
P. H. (Erik) Hamming, Nico J. Overeem and Jurriaan Huskens
Publication
Chemical science, 14 November 2019
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Charge-Based Separation of Proteins Using Polyelectrolyte Complexes as Models for Membraneless Organelles
Authors
Jéré J. van Lente, Mireille M. A. E. Claessens, and Saskia Lindhoud
Publication
Biomacromolecules, 16 August 2019
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Microbial evolutionary medicine: from theory to clinical practice
Authors
Sandra B. Andersen, B. Jesse Shapiro, Christina Vandenbroucke-Grauls, Marjon G. J. de Vos
Publication
The Lancet Infectious Diseases, 1 August 2019
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Real-Time Assembly of Viruslike Nucleocapsids Elucidated at the Single-Particle Level
Authors
Margherita Marchetti, Douwe Kamsma, Ernesto Cazares Vargas, Armando Hernandez García, Paul van der Schoot, Renko de Vries, Gijs J. L. Wuite, and Wouter H. Roos
Publication
Nano letters, 1 August 2019
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The ssos Pipeline: Identification of Solar System Objects in Astronomical Images
Authors
Max Mahlke, Enrique Solano, Hervé Bouy, Benoit Carry, Gijs A. Verdoes Kleijn, Emmanuel Bertin
Publication
Astronomy and Computing, 9 June 2019
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Mosaic origin of the eukaryotic kinetochore
Authors
Eelco C. Tromer, Jolien J. E. van Hooff, Geert J. P. L. Kops, and Berend Snel
Publication
Proceedings of the National Academy of Sciences, 24 May 2019
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Epigenetics and transcription regulation during eukaryotic diversification: the saga of TFIID
Authors
Simona V. Antonova, Jeffrey Boeren, H.T. Marc Timmers and Berend Snel
Publication
Genes & development, 23 May 2019
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Weak Multivalent Binding of Influenza Hemagglutinin Nanoparticles at a Sialoglycan-Functionalized Supported Lipid Bilayer
Authors
Daniele Di Iorio, Mark L. Verheijden, Erhard van der Vries, Pascal Jonkheijm, and Jurriaan Huskens
Publication
ACS nano, 7 March 2019
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Bond percolation in coloured and multiplex networks
Authors
Ivan Kryven
Publication
Nature Communications, 24 January 2019
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The fluid membrane determines mechanics of erythrocyte extracellular vesicles and is softened in hereditary spherocytosis
Authors
Daan Vorselen, Susan M. van Dommelen, Raya Sorkin, Melissa C. Piontek, Jürgen Schiller, Sander T. Döpp, Sander A. A. Kooijmans, Brigitte A. van Oirschot, Birgitta A. Versluijs, Marc B. Bierings, Richard van Wijk, Raymond M. Schiffelers, Gijs J. L. Wuite & Wouter H. Roos
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Nature communications, 23 November 2018
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Maintaining maximal metabolic flux by gene expression control
Authors
Robert Planqué, Josephus Hulshof, Bas Teusink, Johannes C. Hendriks, Frank J. Bruggeman
Publication
PLoS computational biology, 20 September 2018
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A suppression of differential rotation in Jupiter’s deep interior
Authors
T. Guillot, Y. Miguel, B. Militzer, W. B. Hubbard, Y. Kaspi, E. Galanti, H. Cao, R. Helled, S. M. Wahl, L. Iess, W. M. Folkner, D. J. Stevenson, J. I. Lunine, D. R. Reese, A. Biekman, M. Parisi, D. Durante, J. E. P. Connerney, S. M. Levin & S. J. Bolton
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Nature, March 2018
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The quest for cradles of life: using the fundamental metallicity relation to hunt for the most habitable type of galaxy
Authors
Pratika Dayal, Charles Cockell, Ken Rice & Anupam Mazumdar
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The Astrophysical Journal Letters, 21 August 2015
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The habitability of the Universe through 13 billion years of cosmic time
Authors
Pratika Dayal, Martin Ward & Charles Cockell
Publication
arXiv preprint, 29 June 2016
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